[Koha] Cannot upload .mrc file for staging Marc records

[bram vermeir]

Today I upgraded the koha installation from 3.20.05 to 16.05.03
All seems to work just fine, except for the uploading of a mrc file for staging.

Errormessage:
Upload failed -- unable to store file on server

I checked the Koha logs and found this
script not found or unable to stat: /usr/share/koha/intranet/cgi-bin/tools/upload-file-progress.pl

I checked the location and indeed the upload-file-progress.pl file is missing.
I downloaded the file and uploaded it to the correct folder

Next errormessage:
AH01215: (2)No such file or directory: exec of '/usr/share/koha/intranet/cgi-bin/tools/upload-file-progress.pl

The uploads directory has the correct rights and is located in
/var/lib/koha/biblio/uploads

no plack or memcache running on the server

 can someone please help me out?